Illumina MiniSeq paired end sequencing - SRA

ERX11258597: Illumina MiniSeq paired end sequencing
1 ILLUMINA (Illumina MiniSeq) run: 91,791 spots, 25.5M bases, 9.7Mb downloads

Submitted by: charite universitatsmedizin berlin

Study: Rio Mamore virus, Peru

PRJEB64704 • ERP149895 • All experiments • All runs

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We tested 3400 febrile patients from Peru for hantaviruses, yielding 1 Rio Mamore virus (RIOMV) genetically related to a Peruvian RIOMV from 1996. IgM ELISA-based hantavirus incidence averaged over 2020 in Amazonian Peru was 1.6% and IgG ELISA/immunofluorescence-based seroprevalence in 3 Peruvian departments was 2.9%. Hantaviruses are underrecognized human pathogens

Sample: RIOMV

SAMEA114229984 • ERS16213500 • All experiments • All runs

Organism: Rio Mamore hantavirus

Library:

Name: RIOMV_Peru

Instrument: Illumina MiniSeq

Strategy: RNA-Seq

Source: VIRAL RNA

Selection: RT-PCR

Layout: PAIRED

Runs: 1 run, 91,791 spots, 25.5M bases, 9.7Mb

Run	# of Spots	# of Bases	Size	Published
ERR11860590	91,791	25.5M	9.7Mb	2024-07-20

ID:: 33927585

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Sequence Read Archive

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